Selected YASARA Screenshots

The screenshots below are taken directly from the YASARA window, the scenes can be interactively explored with YASARA's new Vulkan graphics engine, which supports real-time soft shadows, per-pixel ambient lighting and billions of atoms. OpenGL is still available for old graphics cards. Many additional screenshots can be found by following the links below:

• YASARA's best graphics: movies for e-learning tutorials and presentations
• YASARA's look across the various operating systems
• Many more screenshots showing YASARA features
  

Myosin with ADP and some important residues highlighted	Interactive visualization of giant structures, each of the 43 million atoms can be clicked, modified or analyzed
The genome builder, which takes a FASTA sequence file and nucleic acid binding proteins to build an entire genome, suitable for coarse-grained MD.	A molecular dynamics simulation of crambin
The postsynapse, a gigastructure built with YASARA. You can interactively zoom in and click, modify or analyze each of the 1.4 billion atoms	Converting structures to a coarse-grained, rigid representation for faster MD simulation
With YASARA you can easily create your custom analysis, write the results to text tables or automatically create scientific reports	A sky-sphere in the background, with reflections in protein secondary structure
YASARA's mixed multiple timestep algorithm to accelerate molecular dynamics simulations	Eight ways to visualize electrostatic potentials from Particle Mesh Ewald (PME) or Poisson-Boltzmann (PBS) calculations
The 1D, 2D and 3D knowledge-based dihedral angle potentials of a serine residue in the YASARA force field	Turning 3D molecules into flat 2D structures for visualization as structural formulas
Analyzing cation-Pi interactions	The small-molecule builder used to create tiotropium
Radial distribution function of water calculated from an MD trajectory	Ray-tracing with the built-in POV-Ray in comic style, adding outlines via depth-buffer analysis
Ray-tracing with the built-in POV-Ray, adding granite textures	A protein crystal including surfaces cut at the periodic boundaries
A molecular surface cut open by an interactive clipping-plane	An example macro that creates images/textures, shows text and a clickable button on each, and places them in bouncing spheres